STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_05433Uncharacterized protein. (722 aa)    
Predicted Functional Partners:
UY3_06515
Uncharacterized protein.
      
 0.510
CCDC96
Coiled-coil domain-containing protein 96.
      
 0.489
UY3_05429
Zinc finger CCHC domain-containing protein 4.
      
 0.481
UY3_05428
Anaphase-promoting complex subunit 4.
      
 0.477
BOD1L1
Biorientation of chromosomes in cell division protein 1-like protein.
      
 0.476
CCDC92
Coiled-coil domain-containing protein 92.
      
 0.465
LGI2
Leucine-rich repeat LGI family member 2.
 
    
 0.459
CCDC113
DUF4201 domain-containing protein.
      
 0.445
UY3_05431
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
      
 0.434
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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