STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEATR5BHEAT repeat-containing protein 5B. (2073 aa)    
Predicted Functional Partners:
UY3_09495
AP-1 complex subunit gamma-1.
   
 
 0.611
UY3_13702
AP-4 complex subunit epsilon-1.
   
 
 0.444
AP4E1
AP-4 complex subunit epsilon-1.
   
 
 0.440
UY3_12288
AP-1 complex subunit gamma-like 2.
   
 
 0.440
FAM32A
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 
 0.436
UY3_16136
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
  
 0.429
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.