STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF8DDB1-and CUL4-associated factor 8. (658 aa)    
Predicted Functional Partners:
UY3_12621
DNA damage-binding protein 1.
    
 0.898
DCAF4
DDB1-and CUL4-associated factor 4.
     
 0.748
LAMP2
Cullin-4B; Belongs to the cullin family.
   
 0.728
UY3_10855
Cullin-4A; Belongs to the cullin family.
   
 0.728
DCAF5
DDB1-and CUL4-associated factor 5.
   
 
0.697
UY3_04945
DDB1-and CUL4-associated factor 6.
 
   
 0.669
UY3_01806
DNA damage-binding protein 2.
    
 0.669
DCUN1D5
DCN1-like protein.
     
 0.658
UY3_00887
RING-box protein 1.
    
 0.652
UY3_17772
DCN1-like protein.
     
 0.631
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.