STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD54L2Helicase ARIP4. (1322 aa)    
Predicted Functional Partners:
RBM34
AT-rich interactive domain-containing protein 4B.
    
 0.565
UY3_15650
AT-rich interactive domain-containing protein 4B.
    
 0.565
PSMA3
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
    
 0.565
UY3_13565
Fanconi anemia group M protein.
    
 0.561
ACTR5
Actin-related protein 5; Belongs to the actin family.
    
 0.560
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.550
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.537
DYRK1A
Dual specificity tyrosine-phosphorylation-regulated kinase 1A.
    
 
 0.527
HELLS
Lymphoid-specific helicase.
  
     0.517
LEO1
RNA polymerase-associated protein LEO1.
   
 
 0.474
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.