STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_03529Transcription initiation factor TFIID subunit 1. (535 aa)    
Predicted Functional Partners:
UY3_10443
Transcription initiation factor TFIID subunit 2.
   
 0.976
TAF7
Transcription initiation factor TFIID subunit 7.
    
 0.974
TAF12
Transcription initiation factor TFIID subunit 12.
    
 0.973
TAF11
Transcription initiation factor TFIID subunit 11.
    
 0.973
UY3_17824
TATA box-binding protein-like protein 2.
    
 0.961
TAF5L
Uncharacterized protein.
   
 0.961
UY3_12848
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.960
UY3_02729
Transcription initiation factor TFIID subunit 9.
    
 0.960
TUT1
RRM domain-containing protein.
    
 0.959
UY3_09219
Transcription initiation factor TFIID subunit 13.
    
 0.959
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.