STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_08831Methylmalonyl-CoA mutase. (700 aa)    
Predicted Functional Partners:
UY3_15791
Methionine synthase.
      
 0.825
UY3_01273
Methylmalonyl-CoA epimerase.
  
 
 0.774
PCCB
Propionyl-CoA carboxylase beta chain.
  
 
 0.714
UY3_08896
Methylmalonic aciduria and homocystinuria type D like protein.
   
  
 0.612
OSBP2
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.596
UY3_12138
ATP-binding cassette sub-family D member 4.
      
 0.581
UY3_14930
Protein FAM63A.
    
 0.570
FAM63B
Protein FAM63B.
    
 0.570
MMAA
Mothers against decapentaplegic homolog.
  
   
 0.538
UY3_18144
Glyceraldehyde-3-phosphate dehydrogenase.
    
 
 0.532
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.