STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPHA6Ephrin type-A receptor 6. (212 aa)    
Predicted Functional Partners:
EPHA5
Ephrin type-A receptor 5.
 
    
 0.948
EPHB2
Ephrin type-B receptor 2.
 
  
  0.910
EPHA8
Ephrin type-A receptor 8.
 
 
  0.908
EPHA4
Ephrin type-A receptor 4.
 
      0.894
EPHA7
Ephrin type-A receptor 7.
 
      0.894
UY3_00683
Ephrin type-B receptor 2.
 
      0.887
UY3_04929
Ephrin type-A receptor 3.
 
      0.884
UY3_15393
Ephrin type-B receptor 5.
 
  
  0.869
EFNA1
Ephrin-A1; Belongs to the SWEET sugar transporter family.
   
 0.680
EFNB2
Ephrin-B2; Belongs to the ephrin family.
   
 0.662
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.