STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAD7Mothers against decapentaplegic like protein 7. (167 aa)    
Predicted Functional Partners:
UY3_09783
E3 ubiquitin-protein ligase SMURF1.
    
 0.981
UY3_02580
E3 ubiquitin-protein ligase.
    
 0.981
TGFBR1
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
   
 0.978
SMAD9
Mothers against decapentaplegic like protein 9.
   
0.965
SMAD5
Mothers against decapentaplegic homolog.
   
0.964
SMAD2
Mothers against decapentaplegic like protein 2.
   
0.949
SMAD3
Mothers against decapentaplegic homolog.
   
0.948
SMAD6
Mothers against decapentaplegic like protein 6.
  
 
0.939
TGFBR2
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
   
 0.816
UY3_11256
BMP and activin membrane-bound inhibitor like protein.
   
 0.804
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.