STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DGCR2Integral membrane protein DGCR2/IDD. (543 aa)    
Predicted Functional Partners:
DGCR14
Protein DGCR14.
 
    
 0.789
UY3_08606
Intersectin-2.
    
 0.606
NECAP1
Adaptin ear-binding coat-associated protein 1.
     
 0.520
PRODH
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
      
 0.489
CRNKL1
Crooked neck-like protein 1.
      
 0.483
UY3_06221
Uncharacterized protein.
      
 0.483
PPM1F
Protein phosphatase 1F.
      
 0.483
UY3_11652
Uncharacterized protein.
      
 0.482
UY3_10600
Intersectin-1.
    
 0.478
UY3_15274
Activating signal cointegrator 1 complex subunit 2.
      
 0.477
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.