STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGFAProtransforming growth factor alpha. (182 aa)    
Predicted Functional Partners:
ERBB2
Receptor protein-tyrosine kinase.
    
 0.902
LRIT3
Pro-epidermal growth factor; Belongs to the G-protein coupled receptor 1 family.
     
 0.778
UY3_06630
Receptor protein-tyrosine kinase.
    
 0.732
HBEGF
Proheparin-binding EGF-like growth factor.
     
0.723
IGF1R
Tyrosine-protein kinase receptor.
     
 0.702
NTRK1
Tyrosine-protein kinase receptor.
   
 
 0.701
KIT
Mast/stem cell growth factor receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 
 0.699
CSF1R
Receptor protein-tyrosine kinase.
   
 
 0.683
EPHA2
Ephrin type-A receptor 2.
     
 0.676
IDE
Insulin-degrading enzyme; Belongs to the peptidase M16 family.
    
 
 0.654
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.