STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_04322Tetraspanin. (224 aa)    
Predicted Functional Partners:
PTGFRN
Prostaglandin F2 receptor negative regulator.
    
 
 0.862
ITGA3
Integrin alpha-3; Belongs to the integrin alpha chain family.
   
 0.714
CD4
T-cell surface glycoprotein CD4.
    
 0.664
UY3_08025
Platelet glycoprotein 4; Belongs to the CD36 family.
   
 0.655
UY3_02702
CD44 antigen.
   
 
 0.643
UY3_18506
Uncharacterized protein.
      
 0.642
CD82
Tetraspanin.
   
 
0.615
UY3_02584
Platelet endothelial cell adhesion molecule.
   
 0.612
UY3_14093
Izumo-Ig domain-containing protein.
     
 0.603
ITGB3
Integrin beta-3.
    
 0.600
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.