STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCGNSecretagogin. (194 aa)    
Predicted Functional Partners:
UY3_15825
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.735
CASK
Peripheral plasma membrane protein CASK.
    
 0.734
BANF2
Barrier-to-autointegration factor-like protein.
      
 0.592
WDR90
WD repeat-containing protein 90.
   
 0.579
FKBP1B
Peptidylprolyl isomerase.
   
 0.572
GUCA1B
Guanylyl cyclase-activating protein 2.
    
 0.542
MAGI3
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
   
 0.524
TNNI2
Troponin I, fast skeletal muscle.
   
 0.521
TNNI1
Troponin I, slow skeletal muscle.
   
 0.521
DCLK1
Serine/threonine-protein kinase DCLK1.
   
 0.500
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.