STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASKPeripheral plasma membrane protein CASK. (901 aa)    
Predicted Functional Partners:
UY3_14763
Protein lin-7 like protein C.
    
 0.993
UY3_12449
Amyloid beta A4 protein-binding family A member 1.
   
 0.991
APBA3
Amyloid beta A4 protein-binding family A member 1.
   
 0.986
UY3_01270
Amyloid beta A4 protein-binding family A member 2.
   
 0.986
UY3_16369
Glutamate [NMDA] receptor subunit zeta-1.
   
 0.963
UY3_11804
Protein 4.1.
   
 0.914
EPB41
Protein 4.1.
   
 0.882
ZBTB14
Band 4.1-like protein 3.
   
 0.882
EPB41L2
Band 4.1-like protein 2.
   
 0.882
FRMD3
FERM domain-containing protein 3.
   
 0.882
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.