STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF236Uncharacterized protein. (140 aa)    
Predicted Functional Partners:
UY3_02112
Uncharacterized protein.
 
     0.926
UY3_16351
DNA excision repair protein ERCC-6.
   
  0.482
UY3_15576
Uncharacterized protein.
 
     
0.478
UY3_15574
Uncharacterized protein.
 
     
0.474
UY3_05869
Zinc finger and SCAN domain-containing protein 2.
 
     
0.468
UY3_15577
Uncharacterized protein.
 
     
0.459
MAMLD1
Mastermind-like protein 2.
   
 0.455
UY3_15572
Uncharacterized protein.
 
     
0.448
UY3_05298
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
    
 
 0.448
CAPN15
Calpain-15; Belongs to the peptidase C2 family.
   
 0.410
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.