STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF38Dynamin-binding protein. (782 aa)    
Predicted Functional Partners:
UY3_06364
Dynamin-binding protein.
 
      0.900
UY3_18277
Myc box-dependent-interacting protein 1.
    
 
 0.560
UY3_06031
Amphiphysin.
    
 
 0.560
UY3_13907
Bridging integrator 2.
    
 
 0.560
UY3_02318
Myc box-dependent-interacting protein 1.
    
 
 0.560
CDC42
Cell division control protein 42 like protein.
    
 0.531
UY3_08606
Intersectin-2.
    
 0.526
UY3_10600
Intersectin-1.
    
 0.520
UY3_00660
Rho guanine nucleotide exchange factor 19.
     
 0.515
NGEF
Ephexin-1.
     
 0.489
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.