STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_01113Prolyl 4-hydroxylase subunit alpha-2. (598 aa)    
Predicted Functional Partners:
PDIA2
Protein disulfide-isomerase A2.
   
 0.834
P4HB
Protein disulfide-isomerase.
   
 0.834
UY3_08522
Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.
   
 0.676
UY3_06806
Protein disulfide-isomerase A3; Belongs to the protein disulfide isomerase family.
   
 0.670
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
  
 0.503
UY3_03365
Leucine-rich repeat and guanylate kinase domain-containing protein.
   
   0.498
COL8A1
Collagen alpha-1(VIII) chain.
    
 0.463
UY3_05197
Collagen alpha-1(XVII) chain.
    
 0.455
COL6A2
Collagen alpha-2(VI) chain.
    
 0.451
COL24A1
Collagen alpha-1(XXIV) chain.
    
 0.444
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.