STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_10064Peflin. (265 aa)    
Predicted Functional Partners:
UY3_04039
Grancalcin.
   
  
 0.625
UY3_13641
Sorcin.
   
  
 0.621
SHISA4
Protein shisa-4.
    
 
 0.602
UY3_10538
Tubby-like protein; Belongs to the TUB family.
      
 0.591
UY3_18913
Protein transport protein Sec31B.
    
 
 0.537
UY3_12499
Protein transport protein Sec31A.
    
 
 0.537
HEBP2
Heme-binding protein 2.
    
   0.503
CAST
Uncharacterized protein.
   
 0.491
KLHL12
Kelch-like protein 12.
    
 
 0.431
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.