STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH23Cadherin-23. (1224 aa)    
Predicted Functional Partners:
PCDH15
Protocadherin-15.
   
0.992
USH1C
Harmonin.
   
 
 0.924
FAT1
Protocadherin Fat 1.
 
 
 0.807
UY3_11473
Cadherin EGF LAG seven-pass G-type receptor 1.
 
   
  0.781
UY3_04669
Whirlin.
    
 
 0.695
UY3_14281
Myosin-VIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.664
UY3_18334
Uncharacterized protein.
 
 
 0.626
UY3_08112
Cadherin-related family member 5.
   
0.626
CCDC58
Coiled-coil domain-containing protein 58.
      
 0.602
LHFPL5
Tetraspan membrane protein of hair cell stereocilia like protein.
   
 0.594
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.