STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX11Transcription factor SOX. (400 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1.
    
 0.564
LEF1
Lymphoid enhancer-binding factor 1.
    
0.543
UY3_01121
Transcription factor 7.
    
 0.535
JUP
Junction plakoglobin.
    
 0.512
SOX6
Transcription factor SOX-6.
    
 0.473
BMP15
Bone morphogenetic protein 15.
    
 0.464
RECQL4
ATP-dependent DNA helicase Q4.
    
 
 0.449
UY3_19118
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 
 0.447
UY3_17926
L-lactate dehydrogenase.
    
 
 0.447
UY3_14346
Transcription factor 7-like 1-A.
    
 0.434
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.