STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_05704Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (569 aa)    
Predicted Functional Partners:
SNCA
Alpha-synuclein; Belongs to the synuclein family.
   
 
 0.507
DRD4
D(4) dopamine receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.482
HTR2A
5-hydroxytryptamine receptor 2A; Belongs to the G-protein coupled receptor 1 family.
     
 0.440
UY3_04470
Tryptophan 5-hydroxylase 1.
      
 0.435
COMT
Catechol O-methyltransferase; Catalyzes the O-methylation, and thereby the inactivation, of catecholamine neurotransmitters and catechol hormones.
      
 0.430
TPH2
Tryptophan 5-hydroxylase 2.
      
 0.418
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.