STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDPD5Glycerophosphodiester phosphodiesterase domain-containing protein 5. (570 aa)    
Predicted Functional Partners:
TSKU
Tsukushin.
      
 0.662
GPD2
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.646
HSPA13
Heat shock 70 kDa protein 13.
      
 0.645
ARHGEF17
Rho guanine nucleotide exchange factor 17.
      
 0.638
P2RY2
p2Y purinoceptor 2; Belongs to the G-protein coupled receptor 1 family.
      
 0.620
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2.
  
 
 0.435
NADK
NAD kinase.
   
 
  0.409
PSMC5
26S protease regulatory subunit 8; Belongs to the AAA ATPase family.
  
 
 0.400
ATAD2
ATPase family AAA domain-containing protein 2.
  
 
 0.400
KATNA1
Katanin p60 ATPase-containing subunit A-like 1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Belongs to the AAA ATPase family. Katanin p60 subunit A1 subfamily. A-like 1 sub-subfamily.
  
 
 0.400
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.