STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_05336PAX-interacting protein 1. (779 aa)    
Predicted Functional Partners:
UY3_06813
Tumor suppressor p53-binding protein 1.
    
 0.860
UY3_06933
Serine-protein kinase ATM; Belongs to the PI3/PI4-kinase family.
   
 0.854
UY3_11416
Lysine-specific demethylase 6A.
    
 0.829
NBN
Nibrin.
    
 0.814
KDM6B
Lysine-specific demethylase 6B.
    
 0.804
UY3_01589
Ankyrin repeat domain-containing protein 32.
   
 0.780
UY3_00376
Structural maintenance of chromosomes protein 6.
   
 
 0.769
UY3_01025
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.756
PWWP2A
PWWP domain-containing protein 2A.
   
 0.750
SEZ6L2
PAXIP1-associated protein 1.
    
 0.747
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.