STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFAPGlial fibrillary acidic protein; Belongs to the intermediate filament family. (518 aa)    
Predicted Functional Partners:
OLIG2
Oligodendrocyte transcription factor 2.
   
  
 0.745
DCX
Neuronal migration protein doublecortin.
    
 
 0.716
Tanabin
Tanabin; Belongs to the intermediate filament family.
    
 
0.695
AQP4
Aquaporin-4; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
  
 0.662
RBFOX3
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
   
 0.655
MBP
Myelin basic protein.
   
  
 0.623
CNP
2',3'-cyclic-nucleotide 3'-phosphodiesterase; May participate in RNA metabolism in the myelinating cell, CNP is the third most abundant protein in central nervous system myelin; Belongs to the 2H phosphoesterase superfamily. CNPase family.
   
  
 0.600
UY3_00191
Calretinin.
   
 0.595
CD4
T-cell surface glycoprotein CD4.
    
 0.590
BDNF
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.571
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.