STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_00979Uncharacterized protein. (459 aa)    
Predicted Functional Partners:
RUNDC3A
RUN domain-containing protein 3A.
   
  
 0.498
UY3_01989
UPF0636 protein C4orf41 like protein.
      
 0.489
CDKN2AIP
CDKN2A-interacting protein.
      
 0.487
PELO
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
      
 0.469
PGBD5
PiggyBac transposable element-derived protein 5.
   
  
 0.453
STOX2
Storkhead-box protein 2.
      
 0.449
UY3_18978
Amine oxidase.
    
 0.441
TBC1D31
WD repeat-containing protein 67.
    
 0.441
UY3_18976
L-amino-acid oxidase.
    
 0.441
UY3_01357
Amine oxidase.
    
 0.441
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.