STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNH8Potassium voltage-gated channel subfamily H member 8. (1086 aa)    
Predicted Functional Partners:
KCNH1
Potassium voltage-gated channel subfamily H member 1.
 
   
 0.904
UY3_13993
Voltage-gated potassium channel subunit beta-1.
    
 0.772
GABRA5
Gamma-aminobutyric acid receptor subunit alpha-5; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.580
KCNG1
Potassium voltage-gated channel subfamily G member 1; Belongs to the potassium channel family.
   
 
 0.514
KCNF1
Potassium voltage-gated channel subfamily F member 1; Belongs to the potassium channel family.
   
 
 0.511
UY3_13893
Protein CEPU-1.
      
 0.504
SLITRK1
SLIT and NTRK-like protein 1.
      
 0.504
UY3_12396
BDNF/NT-3 growth factors receptor.
    
 0.499
FKBP14
Peptidylprolyl isomerase.
   
  
 0.497
FKBP9
Peptidylprolyl isomerase.
   
  
 0.486
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.