STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCPG1Cell cycle progression protein 1. (861 aa)    
Predicted Functional Partners:
RB1CC1
RB1-inducible coiled-coil protein 1.
   
 0.812
UY3_11076
RB1-inducible coiled-coil protein 1.
   
 0.812
UNC79
Protein unc-79 like protein.
    
 0.734
UY3_10813
Protein unc-79 like protein.
    
 0.734
UY3_02136
E3 SUMO-protein ligase RanBP2.
    
 0.570
DYX1C1
Dyslexia susceptibility 1 candidate gene 1 protein like protein.
 
  
 0.495
UY3_14324
Uncharacterized protein.
    
 
 0.491
NPC1
Niemann-Pick C1 protein.
   
  
 0.490
TEX264
Uncharacterized protein.
      
 0.483
KDM6B
Lysine-specific demethylase 6B.
    
 0.478
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.