STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRMD7FERM domain-containing protein 7. (679 aa)    
Predicted Functional Partners:
UY3_17292
Hepatocyte growth factor receptor.
    
 0.563
MST1R
Macrophage-stimulating protein receptor.
    
 0.563
CASK
Peripheral plasma membrane protein CASK.
    
 
 0.536
UY3_12000
Uncharacterized protein.
      
 0.501
NRP1
Neuropilin-1.
     
 0.499
IL1RAPL1
Interleukin-1 receptor accessory protein-like 1.
     
 0.497
UY3_08943
Semaphorin-3B; Belongs to the semaphorin family.
     
 0.484
SLC25A43
Solute carrier family 25 member 43; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.475
RHOF
Rho-related GTP-binding protein RhoF.
     
 0.451
UY3_08606
Intersectin-2.
     
 0.432
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.