STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C1General transcription factor 3C polypeptide 1. (2030 aa)    
Predicted Functional Partners:
UY3_18599
General transcription factor 3C polypeptide 3.
    
 0.928
GTF3C4
General transcription factor 3C polypeptide 4.
   
 0.928
GTF3C2
General transcription factor 3C polypeptide 2.
   
 0.915
BDP1
Transcription factor TFIIIB component B'' like protein.
    
 0.843
BRF2
Transcription factor IIIB 50 kDa subunit.
   
 
 0.765
UY3_09625
Uncharacterized protein.
   
 0.747
UY3_04878
Uncharacterized protein.
   
 0.747
UY3_09113
P43 5S RNA-binding protein.
    
 0.702
UY3_05217
Transcription factor IIIA.
    
 0.702
UY3_17824
TATA box-binding protein-like protein 2.
     
 0.689
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.