STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPN1Tyrosine-protein phosphatase non-receptor type 1. (439 aa)    
Predicted Functional Partners:
IRS1
Insulin receptor substrate 1.
    
 0.928
CTNNB1
Catenin beta-1.
    
 0.921
INSR
Myosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.901
PTPN13
Tyrosine-protein phosphatase non-receptor type 13.
 
  
 0.846
UY3_11565
Tyrosine-protein kinase receptor.
   
 0.785
IGF1R
Tyrosine-protein kinase receptor.
   
 0.785
UY3_01083
Insulin-like growth factor 1 receptor.
   
 0.785
UY3_07993
Receptor-type tyrosine-protein phosphatase kappa.
 
 
 
 0.738
UY3_18766
Tyrosine-protein kinase.
   
 0.737
JAK2
Tyrosine-protein kinase.
   
 0.737
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.