STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_02844Semaphorin-6A; Belongs to the semaphorin family. (1100 aa)    
Predicted Functional Partners:
NRP1
Neuropilin-1.
    
 0.686
MST1R
Macrophage-stimulating protein receptor.
    
 0.647
UY3_17292
Hepatocyte growth factor receptor.
    
 0.635
Plexin-A3
Plexin-A3.
    
 0.586
PLXNA1
Plexin-A1.
    
0.586
PLXNA4
Plexin-A4.
    
 0.586
UY3_03936
Plexin-A4.
    
 0.586
UY3_07202
Plexin-D1.
    
 0.562
UY3_16011
Plexin-C1.
    
 0.551
UY3_12767
Plexin-B1.
    
 0.543
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.