STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_06369Tubby-related protein 4. (310 aa)    
Predicted Functional Partners:
UY3_06372
Tubby-related protein 4; Belongs to the TUB family.
 
      0.900
UY3_06930
Cullin-5; Belongs to the cullin family.
    
 0.580
UY3_02500
RING-box protein 2.
    
  0.533
UY3_11682
Bifunctional aminoacyl-tRNA synthetase.
      
 0.480
UY3_00887
RING-box protein 1.
    
  0.446
UY3_12670
Cullin-associated NEDD8-dissociated protein 1.
   
 
  0.445
UY3_07197
Cullin-associated NEDD8-dissociated protein 1.
   
 
  0.445
UY3_17880
Transcription elongation factor B polypeptide 2.
    
  0.426
UY3_15899
Transcription elongation factor B polypeptide 2.
    
  0.426
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.