STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_02323Protein bicaudal C like protein 1. (729 aa)    
Predicted Functional Partners:
SLC35F1
Solute carrier family 35 member F1.
      
 0.605
UY3_13609
Poly(A) RNA polymerase GLD2.
   
 
 0.579
ZNF516
Uncharacterized protein.
      
 0.511
UY3_09277
Terminal uridylyltransferase 4.
   
 
 0.501
MTPAP
Poly(A) RNA polymerase.
   
 
 0.501
UY3_01525
Terminal uridylyltransferase 7.
   
 
 0.501
APOLD1
Apolipoprotein L domain-containing protein 1.
      
 0.485
UY3_08589
Poly(U)-binding-splicing factor PUF60.
      
 0.483
UGDH
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
      
 0.478
UY3_17370
CCR4-NOT transcription complex subunit 3.
    
 
 0.461
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.