STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_05403NHS-like protein 1. (1423 aa)    
Predicted Functional Partners:
TACSTD2
Histone H2A deubiquitinase MYSM1.
   
 0.852
MMP11
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
   
 0.838
ACTL6A
Actin-like protein 6A; Belongs to the actin family.
    
 0.833
KRT24
SWI/SNF-related matrix-associated actin-dependent regulator chromatin subfamily E member 1; Belongs to the intermediate filament family.
    
 0.806
PBRM1
Protein polybromo-1.
    
 0.729
UY3_03042
Protein polybromo-1.
    
 0.729
SMARCC1
SWI/SNF complex subunit SMARCC1.
    
 0.683
UY3_11855
SWI/SNF complex subunit SMARCC2.
    
 0.683
SMARCD3
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3.
   
 0.681
ASIC1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 0.681
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.