STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_04619CLIP-associating protein 2. (1365 aa)    
Predicted Functional Partners:
UY3_04618
CLIP-associating protein 1.
 
      0.898
NUDC
Nuclear migration protein nudC.
     
 0.783
UY3_05645
CAP-Gly domain-containing linker protein 1.
    
 
 0.703
PLK1
Serine/threonine-protein kinase PLK1.
    
 0.670
BUB3
Mitotic checkpoint protein BUB3.
    
 0.663
UY3_16183
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
     
 0.606
UY3_01372
Cell division cycle protein 20 like protein B.
     
 0.590
CDC20
Cell division cycle protein 20 like protein.
     
 0.590
ESPL1
Separin.
     
 0.577
UY3_01680
CAP-Gly domain-containing linker protein 2.
    
 
 0.558
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.