STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_00231Bromodomain-containing protein 2. (783 aa)    
Predicted Functional Partners:
TAF7
Transcription initiation factor TFIID subunit 7.
    
 
 0.693
DMAP1
DNA methyltransferase 1-associated protein 1.
    
 
 0.562
UY3_04541
Transcription factor E2F1.
    
 
 0.556
CDK9
Cyclin-dependent kinase 9.
    
 
 0.531
UY3_01018
Histone-lysine N-methyltransferase NSD3.
   
 
 0.525
UY3_19209
Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6.
    
 
 0.524
UY3_11653
Cyclin-T1; Belongs to the cyclin family.
   
 
 0.494
UY3_08445
Protein cereblon.
    
 
 0.468
UY3_03529
Transcription initiation factor TFIID subunit 1.
    
 
0.462
TAF1
Transcription initiation factor TFIID subunit 1.
    
 
0.462
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.