STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_00088WD repeat-containing protein 33. (228 aa)    
Predicted Functional Partners:
UY3_15723
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.961
DMWD
Symplekin.
    
 0.961
UY3_02891
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.961
UY3_17782
Pre-mRNA 3'-end-processing factor FIP1.
   
 0.927
UY3_14735
Cleavage stimulation factor subunit 3.
   
 0.927
UY3_12297
Protein arginine N-methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 0.919
UY3_05906
E3 ubiquitin-protein ligase RBBP6.
   
 
 0.915
UY3_10882
Cleavage stimulation factor subunit 2.
    
 0.912
UY3_07423
Pre-mRNA 3'-end-processing factor FIP1.
   
 0.901
TMEM240
Transmembrane protein C1orf70.
    
 0.900
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.