STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_00442NEDD4-like E3 ubiquitin-protein ligase WWP1. (690 aa)    
Predicted Functional Partners:
UY3_09518
NEDD4-like E3 ubiquitin-protein ligase WWP2.
 
  
   0.926
UY3_06637
E3 ubiquitin-protein ligase HECW1.
 
  
  0.865
UBB
Polyubiquitin-C.
    
 0.855
UY3_04550
E3 ubiquitin-protein ligase Itchy.
  
 
0.794
UY3_02430
Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.782
SMAD7
Mothers against decapentaplegic like protein 7.
    
 0.741
UY3_17625
Spartin.
    
 
 0.680
NUMB
Protein numb like protein.
    
 0.665
UY3_18601
E3 ubiquitin-protein ligase HECW2.
 
  
  0.664
UY3_08415
NEDD4 family-interacting protein 2.
    
 
 0.630
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.