STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA72199.1Chemotaxis protein CheX. (155 aa)    
Predicted Functional Partners:
SFB29632.1
Two-component system, chemotaxis family, response regulator CheV.
 
 
 0.993
SFB23259.1
Two-component system, chemotaxis family, response regulator CheY.
 
 
 0.901
SFB47315.1
Flagellar motor switch protein FliN/FliY.
 
 
 0.810
SFB18521.1
Hypothetical protein.
 
     0.706
SFB23237.1
Two-component system, chemotaxis family, sensor kinase CheA.
   
 0.674
SFB23248.1
Chemotaxis protein CheC.
 
 
 0.602
SFB03499.1
Two component transcriptional regulator, AraC family.
 
 
 0.592
SFB25856.1
Helix-turn-helix domain-containing protein.
 
 
 0.574
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
    
 0.538
SFB34173.1
Helix-turn-helix domain-containing protein.
  
 
 0.519
Your Current Organism:
Clostridium frigidicarnis
NCBI taxonomy Id: 84698
Other names: ATCC BAA-154, C. frigidicarnis, DSM 12271, strain SPL77A
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