STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA72712.1Protein N-acetyltransferase, RimJ/RimL family. (187 aa)    
Predicted Functional Partners:
SFB23125.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.815
SFB03056.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.769
SFB28254.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.764
SFB20914.1
Ribosomal-protein-alanine N-acetyltransferase.
  
     0.737
SFB13259.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.726
SFB10407.1
Ribosomal-protein-alanine N-acetyltransferase.
  
     0.718
SFB03893.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.704
SFA68971.1
Ribosomal-protein-alanine N-acetyltransferase.
  
     0.679
SFB41237.1
Ribosomal-protein-alanine N-acetyltransferase.
  
     0.668
SFB35552.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.626
Your Current Organism:
Clostridium frigidicarnis
NCBI taxonomy Id: 84698
Other names: ATCC BAA-154, C. frigidicarnis, DSM 12271, strain SPL77A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.