STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA69552.1DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family. (253 aa)    
Predicted Functional Partners:
SFA83201.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
 
  
 0.904
SFA83185.1
Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.902
SFB29082.1
PTS system IIA component, Fru family /PTS system IIB component, Fru family /PTS system IIC component, Fru family.
 
  
 0.894
SFB23969.1
Ribose-5-phosphate isomerase.
  
 
 0.694
SFA69536.1
Aminotransferase.
       0.689
SFA95473.1
Transcriptional regulator, LacI family.
  
   
 0.570
SFA69231.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
  
 0.569
SFA77246.1
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.569
SFB42136.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
  
 0.569
SFB21595.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
   
 0.549
Your Current Organism:
Clostridium frigidicarnis
NCBI taxonomy Id: 84698
Other names: ATCC BAA-154, C. frigidicarnis, DSM 12271, strain SPL77A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.