STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA92483.1Radical SAM superfamily enzyme YgiQ, UPF0313 family. (527 aa)    
Predicted Functional Partners:
SFA92498.1
Hypothetical protein.
       0.842
SFA92511.1
Phospholipase C.
       0.754
SFA92528.1
Hypothetical protein.
       0.738
SFA69495.1
Single-stranded DNA-binding protein.
   
    0.706
SFA92453.1
V/A-type H+-transporting ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
       0.622
SFA92469.1
V/A-type H+-transporting ATPase subunit G/H.
       0.622
SFA92440.1
V/A-type H+-transporting ATPase subunit K.
       0.620
atpE
V/A-type H+-transporting ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.597
atpF
V/A-type H+-transporting ATPase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.583
SFA92409.1
V/A-type H+-transporting ATPase subunit C.
       0.583
Your Current Organism:
Clostridium frigidicarnis
NCBI taxonomy Id: 84698
Other names: ATCC BAA-154, C. frigidicarnis, DSM 12271, strain SPL77A
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