STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA95092.1Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. (258 aa)    
Predicted Functional Partners:
SFA98649.1
PTS system, beta-glucosides-specific IIC component.
  
 
 0.945
SFB24357.1
PTS system D-glucosamine-specific IIA component, Glc family /PTS system D-glucosamine-specific IIB component, Glc family /PTS system D-glucosamine-specific IIC component, Glc family.
  
 
 0.945
SFA93451.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.809
SFB12179.1
Xanthine dehydrogenase accessory factor.
    
   0.809
SFB32415.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.809
SFB32140.1
Cysteine desulfurase family protein.
    
   0.809
SFA94897.1
PTS system trehalose-specific IIB component, Glc family /PTS system trehalose-specific IIC component, Glc family.
    
 0.712
SFB21621.1
PTS system maltose-specific IIB component, Glc family /PTS system maltose-specific IIC component, Glc family.
    
 0.712
SFB21701.1
PTS system N-acetylglucosamine-specific IIB component, Glc family /PTS system N-acetylglucosamine-specific IIC component, Glc family.
    
 0.712
SFA95111.1
DNA repair photolyase.
       0.615
Your Current Organism:
Clostridium frigidicarnis
NCBI taxonomy Id: 84698
Other names: ATCC BAA-154, C. frigidicarnis, DSM 12271, strain SPL77A
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.