Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFB06006.1 | SFB06027.1 | SAMN04488528_101078 | SAMN04488528_101079 | precorrin-6A reductase. | Cobalt-precorrin 3 C17-methyltransferase. | 0.999 |
SFB06006.1 | SFB06064.1 | SAMN04488528_101078 | SAMN04488528_101081 | precorrin-6A reductase. | Precorrin-4 C11-methyltransferase. | 0.998 |
SFB06006.1 | SFB06081.1 | SAMN04488528_101078 | SAMN04488528_101082 | precorrin-6A reductase. | Cobalt-factor II C20-methyltransferase; Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway. | 0.998 |
SFB06006.1 | SFB06100.1 | SAMN04488528_101078 | SAMN04488528_101083 | precorrin-6A reductase. | cobalt-precorrin-6B (C15)-methyltransferase. | 0.999 |
SFB06006.1 | SFB06147.1 | SAMN04488528_101078 | SAMN04488528_101086 | precorrin-6A reductase. | precorrin-8X methylmutase. | 0.997 |
SFB06006.1 | SFB06177.1 | SAMN04488528_101078 | SAMN04488528_101088 | precorrin-6A reductase. | L-threonine O-3-phosphate decarboxylase. | 0.771 |
SFB06006.1 | SFB06261.1 | SAMN04488528_101078 | SAMN04488528_101093 | precorrin-6A reductase. | Adenosylcobinamide kinase. | 0.714 |
SFB06006.1 | cbiD | SAMN04488528_101078 | SAMN04488528_101085 | precorrin-6A reductase. | Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.997 |
SFB06006.1 | cobD | SAMN04488528_101078 | SAMN04488528_101089 | precorrin-6A reductase. | Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.877 |
SFB06006.1 | cobQ | SAMN04488528_101078 | SAMN04488528_101090 | precorrin-6A reductase. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.987 |
SFB06027.1 | SFB06006.1 | SAMN04488528_101079 | SAMN04488528_101078 | Cobalt-precorrin 3 C17-methyltransferase. | precorrin-6A reductase. | 0.999 |
SFB06027.1 | SFB06064.1 | SAMN04488528_101079 | SAMN04488528_101081 | Cobalt-precorrin 3 C17-methyltransferase. | Precorrin-4 C11-methyltransferase. | 0.999 |
SFB06027.1 | SFB06081.1 | SAMN04488528_101079 | SAMN04488528_101082 | Cobalt-precorrin 3 C17-methyltransferase. | Cobalt-factor II C20-methyltransferase; Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway. | 0.998 |
SFB06027.1 | SFB06100.1 | SAMN04488528_101079 | SAMN04488528_101083 | Cobalt-precorrin 3 C17-methyltransferase. | cobalt-precorrin-6B (C15)-methyltransferase. | 0.989 |
SFB06027.1 | SFB06147.1 | SAMN04488528_101079 | SAMN04488528_101086 | Cobalt-precorrin 3 C17-methyltransferase. | precorrin-8X methylmutase. | 0.998 |
SFB06027.1 | SFB06177.1 | SAMN04488528_101079 | SAMN04488528_101088 | Cobalt-precorrin 3 C17-methyltransferase. | L-threonine O-3-phosphate decarboxylase. | 0.802 |
SFB06027.1 | SFB06261.1 | SAMN04488528_101079 | SAMN04488528_101093 | Cobalt-precorrin 3 C17-methyltransferase. | Adenosylcobinamide kinase. | 0.930 |
SFB06027.1 | cbiD | SAMN04488528_101079 | SAMN04488528_101085 | Cobalt-precorrin 3 C17-methyltransferase. | Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.991 |
SFB06027.1 | cobD | SAMN04488528_101079 | SAMN04488528_101089 | Cobalt-precorrin 3 C17-methyltransferase. | Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.967 |
SFB06027.1 | cobQ | SAMN04488528_101079 | SAMN04488528_101090 | Cobalt-precorrin 3 C17-methyltransferase. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.998 |
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