STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB12506.1Iron only hydrogenase large subunit, C-terminal domain. (565 aa)    
Predicted Functional Partners:
SFA83621.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
 
 
 0.996
SFB12529.1
Thioredoxin-like [2Fe-2S] ferredoxin.
 
 0.981
SFB12489.1
Stage II sporulation protein E (SpoIIE).
 
     0.963
SFB12470.1
[FeFe] hydrogenase, group B1/B3.
 
  
0.891
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
 0.784
SFB21471.1
[FeFe] hydrogenase H-cluster maturation GTPase HydF.
 
   
 0.733
SFB21503.1
Biotin synthase.
 
  
 0.733
SFA83604.1
NAD(P)-dependent iron-only hydrogenase diaphorase component iron-sulfur protein.
 
 0.726
SFB10944.1
FMN-binding domain-containing protein.
   
 0.716
SFB21488.1
Iron-only hydrogenase maturation protein HydG.
 
   
 0.656
Your Current Organism:
Clostridium frigidicarnis
NCBI taxonomy Id: 84698
Other names: ATCC BAA-154, C. frigidicarnis, DSM 12271, strain SPL77A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.