STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB15107.1Spore maturation protein A. (191 aa)    
Predicted Functional Partners:
SFB15085.1
Spore maturation protein B.
  
 0.999
SFA87795.1
Stage III sporulation protein AD.
  
  
 0.682
SFA87846.1
Stage III sporulation protein AA.
  
  
 0.673
SFA78123.1
Stage IV sporulation protein A.
  
   
 0.650
SFA87420.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
 
  
 0.647
SFB15070.1
ABC-2 type transport system ATP-binding protein.
       0.626
SFA87501.1
Stage II sporulation protein M.
  
  
 0.623
SFB15129.1
Hypothetical protein.
       0.623
SFB15143.1
Hypothetical protein.
       0.612
SFB15056.1
ABC-2 type transport system permease protein.
       0.605
Your Current Organism:
Clostridium frigidicarnis
NCBI taxonomy Id: 84698
Other names: ATCC BAA-154, C. frigidicarnis, DSM 12271, strain SPL77A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.