STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB15309.1[FeFe] hydrogenase, group A. (524 aa)    
Predicted Functional Partners:
SFA83621.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
 
 0.999
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 0.996
SFA83604.1
NAD(P)-dependent iron-only hydrogenase diaphorase component iron-sulfur protein.
 0.985
SFB23125.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.984
SFB10944.1
FMN-binding domain-containing protein.
   
 0.982
SFB12529.1
Thioredoxin-like [2Fe-2S] ferredoxin.
 
 0.973
SFB34036.1
NADPH-dependent glutamate synthase beta chain.
 
 0.971
SFB12470.1
[FeFe] hydrogenase, group B1/B3.
 
0.949
SFA83640.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
 
 
0.947
SFA86779.1
Electron transport protein HydN.
  
 0.940
Your Current Organism:
Clostridium frigidicarnis
NCBI taxonomy Id: 84698
Other names: ATCC BAA-154, C. frigidicarnis, DSM 12271, strain SPL77A
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