STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
buk-2Butyrate kinase; Belongs to the acetokinase family. (356 aa)    
Predicted Functional Partners:
SFB20665.1
Phosphate butyryltransferase.
 
 0.999
SFA88810.1
Phosphate butyryltransferase.
 
 0.994
buk
Butyrate kinase; Belongs to the acetokinase family.
 
  
 
0.973
SFB27092.1
Phosphotransacetylase.
 
 
 0.943
SFB23125.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.679
SFB23901.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.671
SFB44782.1
3-hydroxyacyl-CoA dehydrogenase.
     
 0.653
SFB44811.1
enoyl-CoA hydratase.
     
 0.650
rex
Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
      
 0.647
SFB20634.1
Hypothetical protein.
       0.640
Your Current Organism:
Clostridium frigidicarnis
NCBI taxonomy Id: 84698
Other names: ATCC BAA-154, C. frigidicarnis, DSM 12271, strain SPL77A
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