Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA75797.1 | SFA87437.1 | SAMN04488528_100277 | SAMN04488528_100557 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Thymidine phosphorylase. | 0.992 |
SFA75797.1 | SFA87453.1 | SAMN04488528_100277 | SAMN04488528_100558 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.917 |
SFA75797.1 | SFB23941.1 | SAMN04488528_100277 | SAMN04488528_102024 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | dCMP deaminase. | 0.410 |
SFA75797.1 | deoD | SAMN04488528_100277 | SAMN04488528_1006117 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Purine-nucleoside phosphorylase. | 0.932 |
SFA75797.1 | tdk | SAMN04488528_100277 | SAMN04488528_102033 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Thymidine kinase. | 0.961 |
SFA87437.1 | SFA75797.1 | SAMN04488528_100557 | SAMN04488528_100277 | Thymidine phosphorylase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.992 |
SFA87437.1 | SFA87453.1 | SAMN04488528_100557 | SAMN04488528_100558 | Thymidine phosphorylase. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.986 |
SFA87437.1 | SFB23941.1 | SAMN04488528_100557 | SAMN04488528_102024 | Thymidine phosphorylase. | dCMP deaminase. | 0.598 |
SFA87437.1 | deoD | SAMN04488528_100557 | SAMN04488528_1006117 | Thymidine phosphorylase. | Purine-nucleoside phosphorylase. | 0.943 |
SFA87437.1 | tdk | SAMN04488528_100557 | SAMN04488528_102033 | Thymidine phosphorylase. | Thymidine kinase. | 0.930 |
SFA87453.1 | SFA75797.1 | SAMN04488528_100558 | SAMN04488528_100277 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.917 |
SFA87453.1 | SFA87437.1 | SAMN04488528_100558 | SAMN04488528_100557 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Thymidine phosphorylase. | 0.986 |
SFA87453.1 | deoD | SAMN04488528_100558 | SAMN04488528_1006117 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Purine-nucleoside phosphorylase. | 0.952 |
SFA87453.1 | prfA | SAMN04488528_100558 | SAMN04488528_102031 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.543 |
SFA87453.1 | tdk | SAMN04488528_100558 | SAMN04488528_102033 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Thymidine kinase. | 0.885 |
SFB23941.1 | SFA75797.1 | SAMN04488528_102024 | SAMN04488528_100277 | dCMP deaminase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.410 |
SFB23941.1 | SFA87437.1 | SAMN04488528_102024 | SAMN04488528_100557 | dCMP deaminase. | Thymidine phosphorylase. | 0.598 |
SFB23941.1 | dut | SAMN04488528_102024 | SAMN04488528_1002127 | dCMP deaminase. | dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.931 |
SFB23941.1 | prfA | SAMN04488528_102024 | SAMN04488528_102031 | dCMP deaminase. | Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.405 |
SFB23941.1 | prmC | SAMN04488528_102024 | SAMN04488528_102032 | dCMP deaminase. | protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.563 |
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