STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB28330.1Two-component sensor histidine kinase, contains HisKA and HATPase domains. (477 aa)    
Predicted Functional Partners:
SFB28314.1
Response regulator receiver and ANTAR domain protein.
 
   
 0.977
SFB29632.1
Two-component system, chemotaxis family, response regulator CheV.
    
 0.917
SFB28300.1
Ethanolamine utilization protein EutP; Belongs to the EutP/PduV family.
 
   
 0.889
SFB28344.1
Reactivating factor of Adenosylcobalamin-dependent ethanolamine ammonia lyase.
 
   
 0.889
SFB28283.1
Ethanolamine utilization protein EutS.
 
   
 0.849
SFB28395.1
Ethanolamine utilization protein EutL.
 
   
 0.847
SFB28560.1
Ethanolamine utilization protein EutQ.
 
   
 0.798
SFA99189.1
Reactivating factor of Adenosylcobalamin-dependent ethanolamine ammonia lyase.
 
   
 0.795
SFB42997.1
Methyl-accepting chemotaxis protein.
    
  0.784
SFA98961.1
Ethanolamine utilization protein EutQ.
 
   
 0.762
Your Current Organism:
Clostridium frigidicarnis
NCBI taxonomy Id: 84698
Other names: ATCC BAA-154, C. frigidicarnis, DSM 12271, strain SPL77A
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