STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB28894.1Glycerol-3-phosphate dehydrogenase. (475 aa)    
Predicted Functional Partners:
SFB28905.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component.
 
 0.972
SFB28917.1
CxxC motif-containing protein.
 
    0.949
SFA93592.1
Sarcosine oxidase subunit alpha.
 
 0.895
SFB11100.1
Thioredoxin reductase.
 
 0.864
SFA93579.1
CxxC motif-containing protein.
 
    0.856
SFB11084.1
CxxC motif-containing protein.
 
    0.804
SFB46179.1
CxxC motif-containing protein.
 
    0.793
SFB28931.1
Glycerol uptake operon antiterminator.
 
     0.681
SFB36191.1
Lipid kinase, YegS/Rv2252/BmrU family.
   
 
  0.673
gpsA
Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.662
Your Current Organism:
Clostridium frigidicarnis
NCBI taxonomy Id: 84698
Other names: ATCC BAA-154, C. frigidicarnis, DSM 12271, strain SPL77A
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